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What is the Base Rate Fallacy?

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University Course Reader · STEM

Critics said the screening plan fell into the base rate fallacy: with so few true cases in the population, most positive results would be false alarms.

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Overview

The base rate fallacy is judging what a test result means from how good the test is, while forgetting how rare the thing it looks for is. The base rate is that rarity: how many people have the disease before anyone is tested. Take a disease that 1 person in 1,000 has, and a test that catches every real case and wrongly flags 5% of healthy people. Line up 1,000 people. The one ill person is flagged. Of the 999 healthy people, 5% is about 50, and they are flagged too. So 51 people hold a positive result and one of them is ill: a positive is right about 2% of the time. The test is not bad. A 5% slip is small. It decides the answer only because there is one real case to find and 999 chances to slip, so the false alarms outnumber the one real case fifty to one. A 95%-accurate test for a 1-in-1,000 disease: a positive is right about 2% of the time. Count the crowd before you trust the signal.
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Overview

The base rate fallacy is hearing "95% accurate" and assuming a positive result is 95% likely to be true. It isn't, if the thing being hunted is rare, and the base rate is the word for how rare. Run the numbers on a disease 1 in 1,000 people have. Test 1,000 people with a test that never misses a real case and misfires on 5% of the healthy. The one sick person lights up. So do about 50 healthy ones, because 5% of 999 is roughly 50. That's 51 positives, one real: about 2%. The test didn't do anything wrong. A 5% misfire is tiny. It only wrecks the result because there was a single genuine case in the room and 999 chances to misfire, and 50 misfires bury one hit. Doctors fluff this too: asked exactly that question in 2014, 14 out of 61 got it right and 27 said 95%. Before you trust a positive, count the crowd it came from. 😎

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Detail

The base rate fallacy is reading a result by the strength of the evidence alone and dropping the number that matters most: how common the thing was before the evidence arrived. That number is the base rate. In 2014, researchers at a Boston hospital put a question to 61 doctors and medical students. A disease affects 1 person in 1,000. A test for it catches every real case and has a false positive rate of 5%, meaning it flags 5% of people who do not have the disease. A person tests positive. What is the chance they have it? Count it in people. Of 1,000 tested, one has the disease and is flagged. The other 999 do not, and 5% of them, about 50, are flagged anyway. That is 51 positives, one of them real: about 2%. Fourteen of the 61 got it right, and 27 answered 95%. The same question in 1978 produced the same result: 11 right out of 60. What confuses people is that two percentages are both true. The test is wrong about only 5% of healthy people, which is modest. Yet 98% of its positives are wrong, because the healthy crowd is 999 times the size of the ill one, and a small slice of a huge crowd outnumbers the whole of a tiny one. The two scores of a test, sensitivity and specificity, cannot settle this on their own. They describe the test. What a result means for the person in front of you needs a third number, the base rate, and the figure that comes out of combining them is called the positive predictive value. A positive is not worthless. It moved this person from 1 in 1,000 to 1 in 51, twenty times the odds, which is why a positive screen is followed by a second, better test rather than a diagnosis. The same arithmetic runs through fraud alerts, security screening and any search for something rare: before trusting a signal, count the crowd it was pointed at.
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Detail

The base rate fallacy is treating the test's quality as the whole story and forgetting how rare the condition is, which turns out to be most of the story. Start with 10,000 people and a condition that 1 in 1,000 of them has. That's 10 people. A test that catches all 10 and wrongly flags 5% of everyone else flags 10 real cases plus about 500 healthy ones. Of the 510 people now sweating over a positive, 10 are actually ill. Two in a hundred. Both of these hold at once: the test misfires on only 5% of healthy people, and 98% of its positives are misfires. No contradiction. The healthy crowd is 999 times bigger, so 5% of it is a mountain next to all of the other lot. A positive isn't nothing. Your odds climb from 1 in 1,000 up to 1 in 51. Twentyfold, and still small, which is exactly why a positive on a first check earns you a better test and not a verdict. Sensitivity and specificity, the two usual test measures, can't rescue you here. They grade the test. What you want is the chance you have the condition given the positive, and that takes one more ingredient, how common the condition is. Statisticians call the answer the positive predictive value. People have been failing this quiz for decades: in 1978, 60 doctors and students were asked it and 11 got it right, with 27 saying 95%. Our brains grab the vivid fact (the test said yes) and drop the dull one (almost nobody has this). The fix is boring and never fails: count the crowd, in actual people, before you decide what a positive means. 😎

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Analogy

The base rate fallacy is trusting a signal without asking how rare the thing it signals is, and the bank's fraud text shows the sum. Your card makes about 1,000 purchases a year, and suppose one of them is fraud. The bank's system catches that one. It also flags 2% of your honest purchases, about 20, usually a new shop or an odd hour. So 21 texts arrive asking "was this you?", and 20 of them are about your own shopping. The system is not broken. A 2% slip is small. The texts are mostly wrong only because there was one fraud to find and 999 honest purchases to slip on, so the slips outnumber the catch 20 to 1. The one fraud is the base rate, the 2% is the false positive rate, and the 21 texts are the positives. A text still matters: it moves the odds from 1 in 1,000 to 1 in 21, which is why the bank asks instead of blocking the card. Where the match ends: you can answer the bank in a second, while a patient with a positive result needs a second test.
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Analogy

The base rate fallacy is believing an alert before you've counted how many real cases there were to catch, and the self-checkout's "unexpected item in the bagging area" runs the arithmetic all day. A supermarket pushes 2,000 shoppers through the machines on a Saturday. Say two of them are genuinely walking out unpaid. The machine catches both. It also misfires on 3% of paying customers, a heavy bag or a toddler leaning on the scale: about 60 people. So the assistant gets called over 62 times, and 60 of those are law-abiding folk holding a cabbage. The machine isn't bad. A 3% slip is tiny. It only buries the result because there were two thieves to find and 1,998 paying customers to slip on. An alert does mean something: 1 in 1,000 became 1 in 31, which is why a staff member wanders over rather than security charging in. Where it breaks: the assistant settles it in ten seconds. Someone with a positive medical result has to wait for a second test. 😎

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Formal definition β€” The same term, explained the usual way

The base rate fallacy (base rate neglect) is the error of estimating a conditional probability from the diagnosticity of evidence while under-weighting the prior probability, or base rate, of the hypothesis. For a diagnostic test, the probability that a positive result is a true positive is the positive predictive value, PPV = (sensitivity Γ— prevalence) Γ· [(sensitivity Γ— prevalence) + (1 βˆ’ specificity) Γ— (1 βˆ’ prevalence)], which follows from Bayes' theorem; at low prevalence the false-positive term dominates even for highly specific tests. With prevalence 1/1000, sensitivity 100% and a 5% false positive rate, PPV β‰ˆ 1.96%. Casscells, Schoenberger and Graboys (NEJM, 1978) found 11 of 60 physicians and students answered correctly; Manrai et al. (JAMA Internal Medicine, 2014) found 14 of 61, with 95% the modal answer in both. The negative predictive value is the corresponding quantity for negative results. The fallacy is associated with the representativeness heuristic and is mitigated by presenting information as natural frequencies.

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